-
While running the case `equalbug` (TN), the workflow fails with manta rule. Check the screenshot for error
Solution:
The path here https://github.com/Clinical-Genomics/BALSAMIC/blob/dd4e99ebe6…
-
Hello, more information on the parameters and runtime can be found here: #7492
the stacktrace is now:
```
...
22:14:59.985 INFO ProgressMeter - chrUn_JTFH01001653v1_decoy:301 116.6 2161460 1853…
-
Hi,
How should the vcf be annotated for cancer analysis? Do you have an example .ini file?
Regards
Linda
-
| Name | Description | Size | Format | URL |
| --- | --- | --- | --- | --- |
| World Bank - Light Every Night | Light Every Night - World Bank Nightime Light Data – provides open access to all night…
-
There is an update of the revel scores
"February 5, 2020: All files now include GRCh38 positions (computed using liftOver) in addition to hg19/GRCh37 positions", and
the instructions for the pre-p…
-
Ok, used this reference for mapping a WGS file, seemed to work OK, even did GATK base quality recalibration on the resulting BAM. However, after that i want to use Manta to find structural variations,…
-
https://mp.weixin.qq.com/s?__biz=MzA5NjAyMzU1OA==&mid=2247485359&idx=1&sn=ca3056625368cbf084bb4fa56cefcf19&chksm=90b722c6a7c0abd0d5d5b90a1496cebb0b361a58fdcd17313ba2c8c63222caeddeee0c418a32&xtrack=1&s…
ixxmu updated
2 years ago
-
https://mp.weixin.qq.com/s/tnjOukjIFd1M3hVpZ49qlQ
ixxmu updated
2 years ago
-
## Is your feature request related to a problem? Please describe
As previously discussed, some modules can't be tested with the currently used genomics/sarscov2 data, but need human data …
-
Hi,
I got an issue when running infercnv in a mode where ***analysis_mode='subclusters'***
infercnv.953pt