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纳入或整合 SigMA 一些算法实现。
@lihm1
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**Describe the issue**
how to get mutational signatures result by using maftools?
**Command**
Please post your commands and the output (errors or any unexpected output)
my inputfile is a maf fil…
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I think at the moment, we are using both Adam Abehouse's code and the sigfit code.
Refer to https://github.com/mskcc/vaporware/issues/186
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i got mutations from almost 1000 samples, then try `siglasso ` to get the mutational signature as suggested. However, it took more than 12 hours, and it is still running until now.
I have no idea w…
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Hello,
I have been looking at your getGenomesFromMutFeatData() function and I can't seem to understand what the MutationFeatureData is... I have been trying to understand this object for days with …
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/juliancandia/mutSigMapper
Confirm the following b…
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Dear Shixiang,
I really like the package sigminer because it provides the powerful functionalities to extract mutational signatures, especially function **sig_auto_extract** which can extract signa…
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Mockup: https://docs.google.com/presentation/d/1G3sQQ7LGRuMl8U0mruNb6lgqxtUKiu_AN3w3vzMGji4/edit#slide=id.p
![image](https://user-images.githubusercontent.com/16869603/98198371-ccb2f380-1ef6-11eb-8…
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Hello!
The mutational signatures were updated this past June, can you provide these to download in the /data directory please? I attached signatures that I downloaded for v3.1 from here: https://c…
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Hi, Sigven, PCGR can analysis MSI and mutational signatures. Would you like to add Kataegis in the future?
You can see the Kataegis from mutalisk (http://mutalisk.org).
thanks!