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Hello,
We recently preprocessed about 50 rat brains using rabies 0.4.8. The majority of it worked fine with the exception of 1 problematic subject at the end. We ran this with fast_commonspace=tru…
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As anticipated, it turns out that the presence of crystal waters are extremely important for obtaining the correct binding mode of certain ligands. BioSimSpace needs to be modified so that they can be…
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Hello,
would it be OK if I sent you a PR changing `max_non_rigid_registartion_dim_px` into `max_non_rigid_registration_dim_px` ?
See the files that would be affected by the change: https://githu…
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Hi,
I'm having issues with Suite2P registration for particular data. You can find [here](https://drive.google.com/file/d/19xiiNrwLIfrEG4rjxmIQvy_8CA4bE-UN/view?usp=share_link) a snapshot of registere…
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This issue aims to open a brief discussion about the type of registration method to be used for co-registering the axial and sagittal T2w scans as a prerequisite before training a multichannel model. …
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Hello. I have been running my preprocessing pipeline and looking at the QC Report, my structural images appear to have run fine but my Functional EPI Images have not. I can't seem to find any informat…
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Hi Chandler,
sorry I've got another one for you, but maybe the problem is at my end, I'm not sure.
When I launch micro-registration pretty much like in your [examples](https://valis.readthedocs.…
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Hi @gdevenyi
I was running an audit on my template building progress and using the resampled images in nlin/xxx/resample. Shown below is nlin/1/average/template_sharpen_shapeupdate, and then the r…
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**Describe the problem**
Greetings!. I'm trying to apply **ANTS** for pairwise registration. My objects are 3D NMR images of plant seeds, they can have different orientations, and I understood …