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https://github.com/linksplatform/Memory/blob/1dd28922798abf85cbf535a5367395d399b5ec1d/cpp/Platform.Memory/ArrayMemory.h#L4
![9519D724-7DAB-4E4F-9B4D-20B2EB432D38](https://user-images.githubuserconten…
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I ran the whole pipeline using:
```
singularity exec -B $PWD ~/tools/souporcell/souporcell.sif souporcell_pipeline.py \
-i possorted_genome_bam.bam -b filtered_feature_bc_matrix/barcodes.tsv.gz…
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This might be able to be utilised as additional information in a "normal" run. Since we know what each singlet is, we can use the lowest fraction correctly assigned to a singlet and the highest fracti…
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Hello,
Thank you for making available the DropletUtils tool suite. Question please. I am interested in employing your tools as part of pre-processing in the following order: swappedDrops -> chime…
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Hi,
Thank you very much for developing these great packages. Could you elaborate why the following warning?
`Warning message:
In run.CSIDE.general(myRCTD, X1, X2, barcodes, cell_types, cell_typ…
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Posting on behalf of @maratsydney, @edwintse and myself following discussions with @mattodd (and others through GH) over the last couple of days:
Credit to @alintheopen for naming 'The Aussies'.
…
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I tried installing your most recent version:
`devtools::install_github('EDePasquale/DoubletDecon')`
and I am getting the following error:
`Downloading GitHub repo EDePasquale/DoubletDecon@master
…
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LinksBot for Telegram with cleaner code and more features :)
Stack:
- Python
- aiogram
- sqlalchemy
- PostgreSQL
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we need to
1) integrate the raw counts to
2) cluster the data and
3) use the existing annotation to label each cluster.
- I will provide you with this pipeline so you can try to execute it …
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I ran 10 single-cell samples together using SCEVAN, but the program exceeded the available memory on our server (which has 1200 GB of memory). Can you please check if I processed the samples correctly…