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In D4.1, we identify these CDR3 analyses:
- [ ] CDR3 length distribution
- [ ] CDR3 nucleotide and amino acid composition
- [x] Biochemical properties
- [ ] CDR3 sharing/uniqueness between reper…
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New term request Flow cytometry: CD19 lymphocytes low (elthat_110826060858): UMLS: 1536261
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## 🚀 Feature
We would really appreciate it if you could add the rabbit OryctolagusCuniculus as a supported species. Specifically, we need the following ".gene": rabbit TRA, TRB, TRG, TRD.
## Mot…
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options(stringsAsFactors = FALSE)
> # Set the full human ligand-receptor interaction database
> CellChatDB.use # Using a subset of CellChatDB for cell-cell communication analysis
> CellChatDB…
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Hi! This is a great package with many useful resources!
After looking into it, we were wondering if it can also be used to model cellular communication. More precisely, we would like to extend INDRA…
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Hi,
Thanks for providing these useful resources!
While we were using the resources, we got to know that sentences in JNLPBA-IOBES dataset might be incorrectly split.
`MTL-Bioinformatics-2016/data…
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I am having difficulty interpreting the results of a recent CellphoneDB DEGs analysis ran with the Cellsign module. I provided an active_TF.txt file to my DEGs analysis, but the results don’t seem to…
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It seems like some annotations contain upstream proteins that should be annotated to 'regulation of NF-kappaB signal transduction' and/or using the relation 'acts upstream of or within' for the NF-kap…
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[Serana F, Sottini A, Caimi L, Palermo B, Natali PG, Nistico P, Imberti L. Identification of a public CDR3 motif and a biased utilization of T-cell receptor V beta and J beta chains in HLA-A2/Melan-A-…
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We need to be able to map PRO terms used by CL to something the rest of the world can use. I think that means uniprot. Xrefs to uniprot are rare:
https://api.triplydb.com/s/tuAThwx4i
We mostly…