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Dear Yoshi,
I run into problem during contig quality assesment: BUSCO fails. Below see content of busco.log:
```
Copying Augustus config dir to /flash/BourguignonU/Bucek/Aleos_flash/KT1060-2_UL/10-…
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Hi:
Like many, I really like your output for genome visualisation.
I would like to add the BUSCOs for my genome, but I have copied/pasted the written example to include in the json file, and when …
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Add BUSCO completeness to any assembled genomes.
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Hello, do I have to choose which datasets to include, or could I use them all? I am running an analysis on Chelonia Mydas.
The lineage is
```
Lineage( full )
cellular organisms; Eukaryota; Opi…
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/miniconda3/envs/busco/bin/vacmap:4: DeprecationWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html
__import__('pkg_resources').run_script('V…
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https://gitlab.com/ezlab/busco
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Hi,
I am unable to install the recommended version of Busco via conda and the code is no longer available else so I have a newer version: 5.4.3. I ran EUKulele and I don't think busco worked with the…
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![Screen Shot 2022-07-04 at 09 54 32](https://user-images.githubusercontent.com/12142475/177119745-4166bb4b-5cbb-4964-808a-012eeddec050.png)
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BUSCO uses rm to remove the .temp files it generates. The issue with this is that rm can only delete up to 64,000 files. If you have more contigs than that, the program won't remove them.
I recommen…
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EUKulele stopped at the BUSCO step for me
Error message:
`BUSCO run either did not complete successfully, or returned no matches for sample`
I checked the log files and these are the outputs from…