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FlyBase lookup & check already working. Just need to extend to add new feature node.
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https://bioentity.link//#/publication/10.1093/g3journal/jkae157
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FLybase and SGD have more complex multi-term phenotypes that require special consideration in the modeling.
We need to plan and implement ingests for these.
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unicode ``` ``` a.k.a ```\xa0``` is breaking pub load
causing error:
```
/opt/VFB_neo4j/src/uk/ac/ebi/vfb/neo4j/neo4j_tools.py:148: UserWarning: {'code': 'Neo.ClientError.Statement.SyntaxErr…
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This is for example the case for trip RNAi lines, see for example http://flybase.org/reports/FBst0026748.html.
Note that bdsc names do not help here.
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In [OLS](https://www.ebi.ac.uk/ols) it is possible to specify linkouts from xrefs and to display reference images. We should take advantage of this to get links to VFB and to supply reference images …
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some flybase phenotypes are not mapped to their relevant FBbt or any other ontology classes.
for example. there's an annotation between a genotype and the phenotype `adult abdomen & macrochaeta | an…
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Dear all,
The proposal has been made to obsolete GO:0019933 cAMP-mediated signaling
Annotations are here:
https://docs.google.com/spreadsheets/d/1FbtqczOsSDcXydGOk6ydTj6Ux4y_BfaCG9v6ejy2HWQ/e…
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Check annotations to GO:0010737 protein kinase A signaling
Annotations are here: https://docs.google.com/spreadsheets/d/12PMtUTxC4FMVGkyH5drkMi3i30v1K_Q7uhL_lJ-MSbQ/edit#gid=0
AgBase | 1
ARUK-U…
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The following query produces a standard FLyBase linkout table with 1-2 links per FB construct.
```cql
MATCH (f:Feature)(s:Site { short_form: 'FlyLight'})
WITH f, ep MATCH (ep)
#FlyBase ID…