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Where downloading the yfull tree as follows:
ycomp tree download-yfull --hg R-M269
I get the following error:
Downloading YFull tree from ...
Finished downloading YFull tree.
Processing YF…
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Hey is there any way to generate a `Build_17_-_rCRS-based_haplogroup_motifs.csv`? I don't know how you made this but it would be a useful resource for the community.
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When using RCRS vs RSRS for the same file., there is a difference in the output haplogroups. There are much more with RSRS as opposed to RCRS. Is there a big difference in the genome files? Also, ther…
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- based on sub/sup of the perfect variants when it's all sorted
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Hi,
than you for this workflow ! I successfully ran it for 2000WGS ! However, I got a 'too many files open' for VCF_MERGE and I add to modify the 'script' section run `bcftools merge` by batch of …
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### Discussed in https://github.com/FamilySearch/GEDCOM/discussions/118
Originally posted by **atom888888** March 4, 2022
I would propose that GEDCOM 7.x add the ability to store mtDNA and yD…
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Hi,
I'm happy to try out SNAPPY for calling chrY haplogroups! I can see that the ISOGG input is outdated, and you mention in the manual that one possible improvement could be developing an automat…
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Dear all,
Is it possible to run haplogrep2 on non-human species to identify haplogroups? If not, what additional information would I need if I wanted to set this up on another model organism?
Apolo…
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Group = Lineage, which is genetically distinct/close groups of isolates (e.g. serotypes).
VNI subdivision is part of "Group", so technically any lines that have entries for VNI subdivision can be tr…
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in Haplogroups change "search by ID" with "search by name".
This is actually true for the entire project. We should change ID by name on the UI, because it refers to the Haplogroupname and is not r…