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### Is there an existing module for this?
- [X] I have searched for the existing module
### Is there an open PR for this?
- [X] I have searched for existing PRs
### Is there an open issue for this…
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Hi,
I had ~37.8 million Illumina paired end sequencing reads (Plant whole genome with chloroplast and mito genome included). I tried assembling the Chloroplast genome where around 4.39 million read…
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I looked at the wiki but didn't understand it well.
Because it was different if the case is WGS from WIKI.
So please advise. I come up with the workflow as below for my aim at calling variant from…
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Please provide your opinion on the reproducibility of fusion genes detected when analyzed using Arriba. I conducted two types of analyses: 1. A case where the same template was used to create a librar…
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This issue is for keeping track of options for sequencing my DNA. Unfortunately, it seems all known methods require me to grant rights to my genes to the sequencing organization (including some copyr…
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```
http://bcbio.wordpress.com/2013/05/22/scaling-variant-detection-pipelines-for-wh
ole-genome-sequencing-analysis/
```
Original issue reported on code.google.com by `geo...@marsel.is` on 28 May 2…
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Why do we need to execute 'convert mouse gene identifiers to human ones that match data in GWAS summary data'? I don't quite understand. Are GWAS sources different from single-cell data sources?
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Issue destinado a recopilar aquellas fuentes bibliográficas, así como datos de secuenciación y herramientas de tratamiento y análisis de los mismos, que podrían resultar útiles e interesantes a la hor…
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Dear Tcell ExTRECT team,
I have some whole-genome sequencing (WGS) data sequenced at a decent coverage (50x). Can I apply this tool to WGS data and get the t cell infiltration fractions?
Thank…
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## WGS (Whole Genome Sequencing)