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Hello, I would like to ask for the implementation of a SlidingWindowWalker (both for reads and variants), that could be very interesting for other tools. I was thinking that it could be similar to Int…
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A Patient in the NCPI FHIR model can represent either a human or an animal. In the forseable future, the clinical data that will be ingested into the NCPI FHIR server will only contain Patients that a…
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**Is your feature request related to a problem? Please describe.**
I am trying to use the API to retrieve exon genomic start/end coordinates (for a specific genome assembly) for MANE transcripts.
…
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First of all, thank you for this amazing piece of open source software!
I have been using Whatshap for my own researching purposes, and I am investigating if I could leverage this
software to achi…
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We should think of a solution for how to do searches for all variants in all cases.
When using the gemini- and mongo adapters this will be straightforward, we just need to figure out how the interface…
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During meta-analysis of 18 cohorts the heterogeneity analysis fails with the following error message:
## ERROR: Input file has changed since analysis started
When rerunning the same analysis wit…
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Hi,
I am doing a genomic analysis of bats, and I have WGS for about 13 individuals but with unknown ancestry or relatedness, many from different populations.
I read that DeepVariant is one of the be…
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Hi,
Thank you for your all of your work on this!
I'm wondering if it is currently possible or would be possible to have an option to output invariant sites in the output VCF along with variant site…
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Hi!
I noticed that in our case 23289, the 3'UTR polymorphism c.*442_445delTAAA is visible in Scout, but not shown on the front page, although we have the variant saved as a managed variant. This is q…
MUebe updated
11 months ago
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Title: Establishment and lineage dynamics of the SARS-CoV-2 epidemic in the UK.
# General Information
## Please paste a link to the paper or a citation here:
Link: https://science.sciencema…