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I've parsed the orf identifiers from `prodigal v2.6.3`.
Here's my `anvi'o` version:
```
anvi-profile --version
Anvi'o version ...............................: margaret (vunknown)
Profile DB…
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Dear all,
I've started reading MLJBase in an attempt to develop spatial models using the concept of tasks. Is it correct to say that the current implementation of tasks requires the existence of da…
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I'm using Infernal and RFAM to identify group II introns in gymnosperm mitochondria. Using `cmscan --mid --cut_ga --nohmmonly` it identifies 8 out of 16 family Intron_gpII ([RF00029](http://rfam.org/f…
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- [x] New database xref
Classifier : Structure
Resource Name : SWISS-MODEL
ID: O74184
Link : https://swissmodel.expasy.org/repository/uniprot/G5ECJ4).
Description : Homology modelling server
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Hello,
I am working with aptasuite where i have to execute the program on 2000 sequences.
But it is taking too much time, and when the computer is in sleep mode the program stops running.
is it…
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Hi!
I had some question on the wonderful script that you have provided.
1. For the flair-correct, what criteria does this algorithm uses to differentiate reads with corrected and inconsistent? W…
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Proposer un outil pour le calcul de l’indemnité de licenciement
- tag "300" : **indemnité de licenciement**. ( L1234-9 **R1234-5**; L1234-9; L1234-10; L1234-11; **R1234-2**; **R1234-1**; **R1234-…
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This one is hard. This paper:
https://doi.org/10.1371/journal.pone.0032797
Describes a way to generate motifs from the different miRNA
Input: csv file with the sequences and secondary structure:
`…
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The annotation standard for proteomics experiments are not clear enough for curators.
Problems that are causing issues:
1. Differentiating between a purification and an enrichment
2. What to …
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Hi, shujun
When I get the result of whole genome annotation and all LTR-RTs. I find the two results are ambiguous, which makes me confused. I think it's the result of using the uniq lib for annota…