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I downloaded the 638655-record iNaturalist dataset and found 3 fields with full scientific names:
"scientificName" (here called 1)
"scientificName" (here called 2)
"species" (here called 3)
If I c…
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1. Fails (404):
Query: `https://api.gbif.org/v1/species/match?name=Aa&strict=false&verbose=true&kingdom=Plantae&genus=Aa`
Response: `404 - Undocumented Error: response status is 404`
2. Unexpected …
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#### Define our own exceptions
- Occasionally, when want to raise an exception, we find that none of the built-in exceptions are suitable. The distinction is often focused on how applications must ha…
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Hello,
I am using centrifuge to classify metagenomic reads from different environments using nt databse.
For some experiments (e.g., host microbiome, ...), it is very useful to exclude host genome f…
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```
http://purl.obolibrary.org/obo/CL_0000134
This class has multiple issues.
1. It seems to confuse mesenchymal cell with 'mesenchymal stem cell'. As far
as I understand it, mesenchyme is simpl…
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**What do you want to know?**
I've meet the same problem as #106 when I try to run RepeatModeler and fixed it as the suggestion of @jebrosen , by relocate the RepeatMaster to the folder downloaded …
BRNiu updated
3 years ago
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Draft proposal of changes to the Occurrence API to support: filter by checklist, add additional ranks, full classification, checklists dataset key, data types changes.
Decide if this change can be …
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Hi,
I have built a custom database for kraken2 with default parameters.
When i align 16S nanopore reads with kraken2 I have the following lines in the output file.
 from 1984-2022 cove…