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Hi,
Thanks for this great tool.
So, i generated a Manhattan plot for my population using 99.9% as a threshold.
Can you please assist in interpreting the threshold? Eventhough it is 99.9%, it sti…
foala updated
2 years ago
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### Description of bug
there are the title line of scaffolds.fasta produce by SPAdes 3.15.5 with --metaviral.
The last two sequences were duplicated.
>NODE_1_length_52915_cov_2931.632379_cutoff…
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Hi Askarbek,
I'm very new on the metagenomics and trying to use your pipeline ASAR using my illumina MiSeq sequencing data.
I got the .fseed, .ko and .seed file from MG-RAST using terminal with…
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All: I am rather new to this group & would like to introduce open-source applications that I frequently use in our metagenome/metaproteome workflows (primarily on HPC systems):
00. Omega2: https…
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Hi there,
I have a file of genera from some metagenomics sequencing, and I am attempting to use taxize to download higher-level taxonomy data for this file. I create a vector of names (Gnames
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Hi, I had this error over and over again.
Thank you for any help.
Best
```
(metawrap-env) deepbio@deepbio-virtual-machine:~/Documents/AC3_Paper$ metawrap quant_bins -b Coverage_EnergeticaPathwaysG…
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First I want to say thank you for this package, I'm working on some metagenomic data with lots of 'unusual' taxa, and trying to find a good (accessible) database to get a quick summary of characterist…
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Hi,
Cheers on creating hafeZ. I was trying to run this on my own dataset but encounted a python multiprocessing error during the step "Calculating median Z for each roi".
For context I'm runni…
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**Supervisor:** Bérénice Batut
**For degree:** Master
**Status:** In progress
**Keywords:** Python
# Global context
Over the last years public media is reporting more and more about scientifi…
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Hi Phil,
MultiQC v1.5 is not finding BBsplit output, as defined [here](https://github.com/ewels/MultiQC_TestData/blob/master/data/modules/bbmap/sample1/sample1.statsfile). No errors thrown etc, fil…