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Dear Sourmash team,
I want to create sketches for all GTDB genomes and I am using the following command according to tutorial (I want one sketch per fasta file):
time sourmash sketch dna -p k…
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Hi,
I have followed the README and I obtained error after generating the .fastq file using guppy Basecall.
This are the commands I used:
```
.../guppy_basecaller -i .../fast5_files/fast5_pass…
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https://hackmd.io/9ORFRJGaTOiOdEAY-Aih2A?view
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# open lab / Sat + Monday , Jul 20 & 22, 2024 / STAMPS 2024
Suggestion for open lab:
* run the commands below on the "canned" data;
* diagr…
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all the images came without Color
![4](https://user-images.githubusercontent.com/108821320/177739684-ee969f21-715a-45dd-a6d6-39597c14a104.png)
![1](https://user-images.githubusercontent.com/1088213…
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Hello,
I'm trying to create a Diamond reference database for the Uniprot reference proteomes, but the instructions I found for the older version of BlobTools (https://blobtools.readme.io/docs/taxon…
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I was trying to build my own nt index with `make THREADS=16 nt`. It looked like it completed without errors, but there are only two `nt.*.cf` files and `nt.2.cf` is empty.
This is `centrifuge-build…
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The test failures in #41 are probably linked to two issues in the `test_fetch_decompress()` test:
1. The use_wget_if_available argument in `fetch_file()` results in different output for the functio…
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I just tried to load a B. Subtillus 168 from NCBI (AL009126). 4.2 MegaBases, 7.2 MegaBytes.
It loaded in GENtle, but then the JavaScript interpreter (Firefox) threw a "slow script" warning.
![screen…
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Hi,
I am really sorry because I have seen many issues about problems with initialization of the guppy server, but I am not able to solve it.
As it is described in the README, I used this code:
…
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