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**Single processing 部分的 Clustering space 章节**
有监督聚类部分一直运行到以下部分时出问题了:
ov.utils.cluster(adata,use_rep='scaled|original|X_pca',
method='GMM',n_components=21,#可以指定类群量
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I clone the nearest code from Graphormer branch [2b0b9a7],and I install fairseq branch[@ 98ebe4f].The virtual environments was shown,.But when I run the code, it compiles error:
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`Packag…
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- [x] I have checked that this issue has not already been reported.
- [x] I have confirmed this bug exists on the latest version of scanpy.
- [ ] (optional) I have confirmed this bug exists on the m…
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Hi,
I created scatterplots for quality control and want to show them side-by-side to save some space.
I tried it using `subplots`, but this is what happens:
```python
fig, (ax1, ax2) = plt.…
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Dear team,
It is hard to install tkna in a conda environment, the infomap was cannot complie without any instruction like gcc version in infomap github page.
Anyway, I'm using your interface …
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- [x] I have checked that this issue has not already been reported.
- [x] I have confirmed this bug exists on the latest version of scanpy. - Version '1.7.1'
- [ ] (optional) I have confirmed this b…
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I 'm trying to install wot via pip on python 3.6.8 version, windows 10 system. After a few requirements satisfied ,I am stuck at the procedures of installing several dependent packages like fisher, l…
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I am facing the following problem while installing Zen in python2.7. Please suggest the required numpy and cython version so that I can resolve this problem.
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Dear developer,
I get an error when running the following code:
`progeny = dc.get_progeny(organism='Mus musculus', top=500)`
the error is : error: Error -3 while decompressing data: invalid code …
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Dear,
Can you add a function to calculate the average expression of each gene in each cluster ?