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CAnBioNet
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TkNA
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Add nash example dataset
#83
SurvivorLinux
opened
3 weeks ago
0
Issue on the interface version of TkNA
#82
catslu
opened
1 month ago
1
'File name too long' error?
#81
zhuxinyue1998
closed
3 months ago
0
Version 1.2.1
#80
macovskym
closed
6 months ago
0
Version 1.2.0
#79
macovskym
closed
6 months ago
0
Cython error?
#78
cmkobel
closed
1 month ago
2
Nci div 0 assess nw error
#77
newmanno
closed
8 months ago
0
Mark required arguments in calc_network_properties.py as required
#76
macovskym
closed
9 months ago
0
Add option to filter on correlation coefficients
#75
macovskym
closed
9 months ago
1
Fixed crash and also added option for BiBC on multiple groups
#74
newmanno
closed
9 months ago
1
Ensure consistent ordering of edge types in subsample analysis table
#73
macovskym
closed
11 months ago
1
Fix percent inclusion column from subsample analysis always being 100%
#72
macovskym
closed
11 months ago
1
Update run_on_subsamples.py to use Dataset class
#71
macovskym
closed
11 months ago
1
Version 1.1.0
#70
macovskym
closed
11 months ago
0
Update requirements to resolve vulnerabilities in older versions of some packages
#69
macovskym
closed
11 months ago
0
Version 1.1.0
#68
macovskym
closed
11 months ago
0
Upgrade Pillow from 9.0.0 to 9.2.0 due to vulnerabilities in older versions of Pillow
#67
macovskym
closed
11 months ago
0
Version 1.0.0
#66
macovskym
closed
11 months ago
0
Dot plots now outputs to two different places instead of all in the plots directory
#65
newmanno
closed
11 months ago
0
Use updated version of pearson constant input warning from scipy
#64
macovskym
closed
11 months ago
0
Prevent text from overlapping in dot plots
#63
macovskym
closed
11 months ago
0
calc_network_properties - added user-specified output directory
#62
newmanno
closed
11 months ago
0
All shortest paths user specified output directory
#61
newmanno
closed
11 months ago
0
louvain - added user-specified output directory
#60
newmanno
closed
11 months ago
0
infomap - added user-specified output directory
#59
newmanno
closed
11 months ago
0
calculate assessment properties per data type
#58
newmanno
closed
11 months ago
0
Dot plots specify output dir
#57
newmanno
closed
11 months ago
0
Upgrade scipy from 1.8.0 to 1.10.1 due to vulnerability in older versions of scipy
#56
macovskym
closed
11 months ago
0
Bump scipy from 1.8.0 to 1.10.0
#55
dependabot[bot]
closed
11 months ago
2
Update example command for louvain clustering to match changes to arguments
#54
macovskym
closed
11 months ago
0
Only show outliers once in abundance plots
#53
macovskym
closed
11 months ago
0
Make the colorbar always show the 'High' tick in density plots
#52
macovskym
closed
11 months ago
0
Use correct icons in legend in abundance plots
#51
macovskym
closed
11 months ago
0
Ignore nodes that don't appear in the final network in dot plots script
#50
macovskym
closed
11 months ago
0
Ensure node names are converted to strings before contatenation in dot plot script
#49
macovskym
closed
11 months ago
0
Update example commands to match current script argument sets
#48
macovskym
closed
11 months ago
0
Update documentation to reflect change in data format from NetCDF to ZIP
#47
macovskym
closed
11 months ago
0
Gives shared memory an ID corresponding to its runner to avoid conflicts between runs
#46
macovskym
closed
11 months ago
1
Raise exception during intake if input data contains negative values
#45
macovskym
closed
11 months ago
1
Add config option 'noPUC' to disable PUC in network reconstruction
#44
macovskym
closed
11 months ago
1
Added adjustText to requirements
#43
newmanno
closed
1 year ago
0
Use unix line endings and remove trailing whitespace
#42
macovskym
closed
1 year ago
0
Specify colors for groups
#41
newmanno
closed
1 year ago
1
Correct help text in random network scripts from referencing pickle files to ZIP files
#40
macovskym
closed
1 year ago
0
Fix metatreatment selection
#39
macovskym
closed
1 year ago
1
find_all_shortest_paths_bw_subnets.py uses either csv or pickle file as input
#38
newmanno
closed
1 year ago
1
Labels on KDE plot no longer overlap
#37
newmanno
closed
1 year ago
1
Infomap partitions on just each data type, and can import network fro…
#36
newmanno
closed
11 months ago
0
Louvain partitions on just each data type, and can import network fro…
#35
newmanno
closed
1 year ago
2
Louvain within data type partitioning and CSV network input
#34
newmanno
closed
1 year ago
1
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