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@marinkaz Thank you so much for your work! Would you please explain to me why the adj_mats_orig contains both gene_adj and gene_adj.transpose (the same to drug_drug_adj_list)? I think that a 'gene_adj…
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Сюда складываем список статей, которые точно будем цитировать.
Выкладывать сразу в BibTeX формате со ссылкой, что это и зачем.
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Hi everyone
I am trying to run CellChat on a remote Linux server with a scRNAseq dataset (including preset cluster annotations). Everything appears to be working up until identifyOverExpressedGenes…
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```
The new PSI-MI TAB 2.6 should extend the current 2.5 with this 16
additional columns:
PSI-MI TAB 2.6
- expansion -> CV (spoke, matrix, none, bipartite)
- biological role A
- biological role B
- …
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http://localhost:8080/api/match/jaccard?id=HP:0007280
```
ontologyUris:
- http://purl.obolibrary.org/obo/hp.owl
ontologyDataUris: []
dataTsvs:
- ./Hs_disease_phenotype.txt
curies:
# …
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Error whilst precomputing:
> at org.intermine.web.task.PrecomputeTemplatesTask.precomputeTemplates(PrecomputeTemplatesTask.java:218)
> at org.intermine.web.task.PrecomputeTemplatesTask.execute(Precom…
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### **Glycolysis**
- **Accuracy**: The model correctly represents glycolysis occurring in the cytoplasm, where each glucose molecule is converted into two pyruvate molecules, yielding a net gain of…
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From the file in issue #7 [MorphMap_gene_gene_scoring_data_with_CRISPR.xlsx](https://github.com/broadinstitute/2023_12_JUMP_data_only_vignettes/files/13844874/MorphMap_gene_gene_scoring_data_with_CRI…
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Hi PLIPify team!
I would like to be able to visualize backbone vs side chain contacts as they have different consequences for drug resistance and multi-target activity. It doesn't look like this is…
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Evidently `biolink:BiologicalEntity` has been turned into an abstract class. We need to verify this, and if so, make the necessary changes to `curies-to-categories.yaml`. Slated to be addressed in the…