-
**Is your feature request related to a problem? Please describe.**
MSF relies on the order of the protein sequences in the faa files to identify systems. However, sometimes the proteins files downloa…
-
Dear Edward,
I greatly appreciate the work you are doing on openFaaS-fargate. Thanks to your awesome terraform scripts I was able to set up OpenFaaS on AWS Fargate. However, I am really struggling …
chkgk updated
5 years ago
-
Dear developer, I was trying to download the pep.all.fa files for the species “Conger conger” and “Gymnothorax javanicus” from the ensembl database. But I found that there are no relevant files for th…
-
Hi! I was trying to run Padloc on my FAA/GFF file combo from a phage genome (both are outputs from Multiphate2 with ORFs predicted by Phanotate). Padloc failed with the error message
`ERROR >> 3 pr…
-
I recently used the GET:PHYLOMARKER program but when running the command "run_get_phylomarkers_pipeline.sh -R 1 -t DNA" in the core directory on the screen it appeared that some sequences were discard…
-
Dear Dev team,
your tool is pretty handy, However, I noticed that he tries to download files that don't exist.
In particular, if I'm trying to download the amino acid sequences (eg GCA_016840515.1_A…
-
I was wondering how would you approach the documentation of an AWS Lambda function (or anything similar).
The handler would be:
```js
// ./src/createRecord.js
module.exports = (event, context, c…
-
### User checklist
- [x] Are you using the latest release? Yes
- [x] Are you using python 3? Yes
- [x] Did you check previous issues to see if this has already been mentioned? Yes
- [x] Ar…
-
Hi,
I have several bins (say 1.faa 2.faa ... 100.faa) in a bin/ folder. In single mode, EukCC successfully gave results for ~ 70% of them. However, when in folder mode, some of the bins were lost f…
-
Looks like this endpoint is deprecated and now uses https://soa.smext.faa.gov/asws/api/airport/status/. The script runs fine with the new endpoint but per the doc, the number of airports in scope is d…