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ping: @Starnite!
Gonna leave a list here for you to consider. I have an inkling of the necessary tools to get these done. I've also ranked them (roughly) by what I think the difficulty would be. T…
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I am trying to obtain m6a modifications from direct RNA sequencing of the avian influenza virus. It seems I have been able to obtain the eventalign.txt file... but after running m6anet dataprep the o…
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```
Tags are not nested correctly for example the output
influenza virus
This is because the system can't distinguish between some end tags, this is
partially a problem with XML
```
Original is…
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Idea is to generate a diary chronicling the spread of a fictional virus with transmission characteristics similar to Ebola or influenza, from the point of view of the virus. Actual symptoms TBA but pe…
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### Is your feature request related to a problem? Please describe. For generic questions use Q&A section in the Discussions forum above.
Hello,
I'm currently using SPAdes for de novo assembly of a…
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This is a [nice paper](http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0027631) from my old adviser that attempts to identify what host a virus can infect based on its genome using mu…
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Dear [Giancarlo](https://scholar.google.fr/citations?user=5N9zvuoAAAAJ&hl=en),
I am wondering whether DCA model will also be powerful for influenza?
Thanks.
Shicheng
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@cassiawag @miparedes ---
I'm using reference virus genome `A/Beijing/32/1992` to root each cluster phylogeny. It would work to use `augur refine` to generate a timetree and root things this will,…
trvrb updated
5 years ago
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Fraser et al. (2009) Pandemic Potential of a Strain of Influenza A (H1N1): Early Findings, report:
> Given estimates of $R_0$ and the current epidemic size $x$, we can estimate the number of genera…
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It would be really nice to internally reference citations that get automagically formatted. For example, the latex internal references.
For that matter, having internal references to sections and sub…