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`` has been marked as a candidate for deprecation (#55). It is [used in NeuroML2](https://github.com/NeuroML/NeuroML2/blob/master/NeuroML2CoreTypes/Channels.xml#L59), though.
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## *Repository Creation Request for Bioreactor Modeling and Simulation Lab IITD*
1. #### Coordinating Institute: IIT Delhi
2. #### Approver’s Name: Prof. A K Srivastava
3. #### Approved Propo…
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such as https://www.wikipathways.org/index.php/Pathway:WP1438
How can we annotate the species?
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Thank you for this amazing library!
I'm using it for modeling classical behaviour of some systems. The idea is to solve complex (4-10 equations) system of ODEs with scipy's ```odeint```, while the …
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Currently `test_biosimulators` runs tests on the following biosimulators: biosimulators_tellurium, biosimulators_cobrapy, biosimulators_cbmpy, biosimulators_bionetgen, biosimulators_gillespy2, biosimu…
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Hi all,
There might be a bug in ammonia_model, in its prediction of (3,3) flux : @keflavich,@jpinedaf
I was trying to fit NH3 (3,3) lines along with the (1,1) and (2,2) using the 'ammonia' fit…
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**Description**
Suggestions for vat:
1. When opening the glass above the vat, exhaust gases based on its pressure and stratification, rather than replacing the whole vat with air.
Meanwhile, I …
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For acquisitions such as for PDE4B, the PET data are divided into two runs due to the long scan time. Currently, petprep_extract_tacs runs for this, but the output in terms of nifti files and tsv file…
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Olá a todos, vou falar em pt-BR, pois pelo que vi não tem nenhum estrangeiro - ainda - no projeto. Para validar o algoritmo de descolamento acho válido termos ao menos 3 posições conhecidas... No caso…
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John relayed Frank's suggestion to use a subset of inter-residue contacts as input features for MSM-building: we would like to use just "the subset of contacts that change during a simulation." I've b…