-
`summary.nblastfafb` subsets for the top N hits and only then calculates and reorders by mu_score. This leads to two potential problems:
(a) If there are nblast hits with high mu_score that are not a…
-
When I executed the commend "source("download_data.R")" under NBLAST_on-the-fly-master, an error showed: Error in library(flycircuit) : there is no package called ‘flycircuit’. Would you mind letting …
-
Hi Jingpeng!
I was thinking about using NBLAST with reneu so I'm building it on MacOS with miniconda and python3.8. I managed to install the environment, then ran setup.py develop, but when I do `p…
-
If you do one search with the upload a tracing page, it works. However if you do two searches, on the second search it doesn't seem to do anything i.e. you click on the nblast button and nothing happe…
-
Just to make a note of what I noticed this week.
While navigating between the tabs, without doing a search, is using up over 800Mb of browser memory.
I noticed this on Firefox (46.0.1), Greg saw the…
mmc46 updated
8 years ago
-
Currently:
(Individual)-[:has_source { ID_in_source: 'fubar' })-(:data_source { data_link_pre: ''...})
Switch to
* Generic linkouts (NEO only):
* (n)-[hasDBxref { accession : '' }]->(…
-
- make .plot3d return custom class that allows adding/removing of neurons
- make .plot3d search for existing vispy canvases
Also: rotate object by default
-
It would make it much easier to navigate VFB, and to use it coming from an external site like NBLAST if some more info on clusters was added to the term info section of FC individuals (that are part o…
mmc46 updated
8 years ago
-
Stacking query constraints is working fine in the query builder as seen below (both NBLAST and NeuronBridge queries appear) but in the list returned in the term info derived from query checker (https:…
-
LCA would be better, but not sure possible
```cql
Match (n:Class { label: 'EB-PB 1 glomerulus-D/Vgall neuron'}),
(m:Class{ label:'EBw.AMP.s-Dga-s.b neuron'})
MATCH path=(n)-[:SUBCLASSOF*0..3]->…