-
maybe we could use a dataframe for storing modes instead?
-
The Yeast v9 GEM: https://raw.githubusercontent.com/SysBioChalmers/yeast-GEM/main/model/yeast-GEM.xml
cause a `parse` error during `_get_reaction_system`
```julia
julia> prn, cb = load_SBML("yeas…
-
How well can foundation models for the tree of life (e.g., BioClip) identify one of the world's most speciose taxanomic groups (beetles)? If NEON could take pictures of beetles and couple them with AI…
-
Hi Gotoh,
Recently, I'm trying to replace genewise with your spaln. I found spaln could get more expected gene structure as query protein. It seems great! To apply in non-model and non-reference ge…
-
So, a thing that you have in chemistry is that you have a solution, within which your species are. However, there is a limit to how much of each species the liquid can solve, and the amount of a speci…
-
Hello,
some of you might remember me. I know Deepvariant works well in human and in some species like rice, if I recall well. In short, all species with (very) low heterozygousity. I wonder if you …
-
Hello Ben,
Thank you very much for your DMRichR package.
I am working with a non-model species and would like to use your package. I have followed your advice (issues #37 and #63) to generate m…
-
The following script is an autocti example script:
https://github.com/Jammy2211/autocti_workspace/blob/main/scripts/dataset_1d/modeling/start_here.py
It has the following assertion:
```
trap…
-
Hi,
To construct a kegg database for a species that is not available in Kegg you wrote in your paper that makeDB.kegg.v1.0.sh can be used but this script is not available in AllEnricher. Would it b…
-
Can use this software in non-human species, e.g. cattle? If yes, how I can build pre-trained model? If human model can be extended to other species?