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Hi,
I am trying MOFA for integrating Proteomics and RNA-seq dataset. I run the following codes.
```
`dd_WO_batch
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Hi there,
I'm new to proteomics analysis and R. I followed the tutorial on the website for the R package installation and completed the data entry. However, when I try to draw a heatmap with DEP2 …
EEnim updated
1 month ago
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**Description:**
My name is Matthew Marino. I am a CFDE GlyGEN summer intern working under Jeet Vora and Rene Ranzinger. I am currently trying to create multiomics workflows starting with transcripto…
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It'd be nice to get _ALL_ data of a particular data type (transcriptomics, proteomics, etc.) regardless of source. Can you add a function to do this? We can also filter by source after the fact.
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We should have a prototype of an SDRF definition for metabolomics data. EPMA will work with SDRF for the standard metadata for samples for proteomics and metabolomics, and in principle, the file forma…
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Greetings,
this does not warrant a PR, but here is a suggestion that might ease searching programs in desktop environment by entering key words (also added translations for languages I know).
[D…
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When using the OBI lookup service for terms relevant to targeted/untargeted metabolomics and proteomics assays used in MoTrPAC data, I wasn't able to find the terms for the following:
```
Targeted 3…
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**Is your feature request related to a problem? Please describe.**
Some properties in e.g. the NGS measurement template are not very straight forward to understand, what the required values look like…
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@ulo please see:
https://github.com/compomics/ThermoRawFileParser
the tool is described in the following manuscript (preprint)
https://www.biorxiv.org/content/10.1101/622852v1.full
it would he…
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Many papers on mass-spectrometry based proteomics have shown the use of deep learning for intensity prediction, combining scores across search algorithms, retention time, collision corss section predi…