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### Description of bug
I have an error on Spades 3.15.5 downloaded and installed as Binary from here (GitHub Releases). It is the same issue as reported in #1267. Unfortunately, it is marked as "outd…
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Hi,
this concerns real patient data (pubished here with the consent of the patient). The gzipped-fastq file has 700MB. My analysis referred to the taxids 1293575 and 47466 only. (So it might well b…
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Hi!
I am trying to download the full db using Aspera and I got an error at step 9 :
Completed: 392708K bytes transferred in 58 seconds
(54553K bits/sec), in 14 files, 1 directory.
2022-02-15 …
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Links to metaproteomic public repositories
IDEA:
It would be a good idea to add a few common publically available metaproteomics databases (see HOMD database for an example below) to the Protein…
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Hi, thanks for the amazing tool by the way! I'm having an issue where RAxML can't parse alignments for which there are sequences made entirely of undetermined characters:
[e] error while refining…
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Hello everyone. I've recently started using Centrifuge, and I've been able to create a viral index and use it with my metagenomic data. However, when I'm trying to build a bacteria index (bac), the pr…
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### Is your feature request related to a problem? Please describe. For generic questions use Q&A section in the Discussions forum above.
rRNA and tRNA are thought to be difficult to be assembled from…
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Hey there, I am really astonished how easy it is with your script to visualize genes, but unfortunately I am working a lot with genome drafts, so unclosed genomes with many contigs in one genbank file…
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(qebil) -bash-5.1$ pip install qebil
ERROR: Could not find a version that satisfies the requirement qebil (from versions: none)
ERROR: No matching distribution found for qebil
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Dear users, I wonder if I can use deepBGC with metagenomic samples? In the paper describing the software it is mentioned as a useful tool for this kind of data but I don't know if it is implemented in…
drelo updated
3 years ago