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Hi, @Pooran-Dewari
Thank you for these additions to the `Blacklist` software for identifying problematic regions of the genome. There are a few more details about identifying Blacklist areas that …
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Today I upgraded from lighter 1.0.7 to 1.1.1 and I first noticed a problem when 1.1.1 was outputting different number of reads in the two output files, and then noticed it was also passing far fewer r…
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I've tried to run kProcessor with kmer size 11 and it threw an error
```
Floating point exception (core dumped)
```
The same happens with kmer sizes 13,15,17
After decreasing the MQF "q" value…
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Hi, I have a set of individuals I want to compute jacquard distances for.
I've produced a kmc database for each individual. One way I thought of to compute these distances is for each pair of indiv…
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When a kmer in a read includes IUPAC ambiguity codes, add all possible concretizations of that kmer.
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Hi,
First off, many thanks to the authors for a fantastic tool.
I have an issue with running krakenuniq-build with the --max-db-size option. I'm getting an enormous number of messages along the …
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Hi, I am not able to build with gcc version: `gcc (Ubuntu 9.3.0-17ubuntu1~20.04) 9.3.0`
as I get the following error:
```
$ make
g++ -std=c++11 -O3 -funroll-loops -fopenmp -I./htslib -o nebula…
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I'm building an EasyBuild module for fastq-tools.
Compilation fails because a spurious linker option is used:
```
== 2016-05-08 08:08:13,937 build_log.py:152 ERROR cmd " make -j 4 LIBTOOL=libtool" e…
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Talked to @phoenixAja about this ... `translate` currently takes up to 1.5 days on some single cell datasets
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Hello,
I'm trying to run scHLAcount but having this error.
Sharding sequences...
Got 373889 sequence chunks
Assembling 114 shards...
Done separate de Bruijn graph construction
Starting mer…