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Hi there,
I have been trying with diamond blast to perform searches that will output only identical hits (100% identical no mismatches)
What I have tried so far is to set the id to 100 and --que…
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I've been setting up protocols with the ReproIn conventions on our Siemens Prisma Fit running XA30 software. I have successfully converted a handful of different protocols now with heudiconv, and am n…
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| | |
| --- | --- |
| Bugzilla Link | [22209](https://llvm.org/bz22209) |
| Version | unspecified |
| OS | Windows NT |
| CC | @JonasToth,@Blackhart |
## Extended Description
Provide a transform t…
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Hello!
I was just wondering if this software would be useful to determine full haplotypes or quasispecies in "multiple" CRISPR edited polyclonal mixtures (for example 2 sgRNA's cutting close to each …
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See the discussion at https://github.com/UB-Mannheim/ocr-fileformat/issues/78
cneud updated
2 years ago
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Hello,
Thank you very much for developing such a great polishing tool.
I have used Racon to polish my raw contigs (assembled using raw ont reads) twice with ont reads. Then I called variations for…
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Hi,
We recently detected that gff output form mirtop stats gives unexpected results. We got two entries for canonical (variant=NA for many miRNAs instead of a single one (one of the two in fact is …
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This issue can serve as a placeholder for use cases for sourmash/MinHash more generally.
Stuff we already have implemented:
* basic MinHash comparisons etc
* metagenome taxonomy breakdown
* st…
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# Changelog / Upcoming Changes
## v0.5
- [x] update existing jbrowse instances on disk (adding new tracks, also support pulling info from apollo) f4206bc58448bb39e5fae31942477c45642a9fca
- [x] ge…
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Hi,
I am trying to run TLDR on a human nanopore dataset. I got thousands of clusters for each chromosome, for example:
_**2021-05-03 14:03:21,455 loaded 5734 clusters from blood_gDNA.fastq-TLDR/chr…