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Sometimes, Ray Meta seems stuck. The log output looks as follows:
```
...
Rank 7 computing contig abundances [63043/130531] [118/118]
Rank 77 computing contig abundances [62815/130236] [1/118]
…
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### Description of bug
HI,
I am trying to assemble genome skim data, on spades (have tried both installing through conda and through downloading source code and compiling) and every time I do, I get…
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Dr. Good,
I really enjoyed the paper that this code was written for and I'm looking to apply your pipeline to some sequence data from a long-term evolution experiment that our lab is conducting. I …
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## Portfolio
Hi there! I'm Rasul, third-year CS student at ITMO University!
## Target topic categories
I would like to work on some topics related to CS. Maybe, explaining solutions for v…
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Hi Zhichao,
What should we take as the input for the parameter - -in-gn when we set **-rt metaT**? Or we don't need to use the parameter - -in-gn when taking the metatranscriptomic reads?
Best,
…
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Hi,
Thanks for the cool tool!
I ran `metawrap` on 5 metagenome samples with the following commands. The version of `metawrap` is 1.2.1.
```shell
# kraken
metawrap kraken -o $WORKDIR/metawr…
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Hey @allind
I tried to install eukdetect but when I run this command:
conda env update --name Eukdetect -f environment.yml
it gave an error saying:
SpecNotFound: Invalid name, try the format: us…
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I've been working on doing gene-level summaries of metagenomes by exhaustively mapping reads with DIAMOND against a comprehensive non-redundant database of proteins (UniRef90). The result of this proc…
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**Description**
As PSD I want to create a first draft design for RVI new project (multipick) that will reflect lims architecture and required components to solve the current list of user requirements…
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### Description of feature
Greengenes2 recently came out. Greengenes2 is a new release of the Greengenes database that has been redesigned from the ground up and backed by whole genomes, focusing on …