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Apparently this is already a part of spades, allowing users to assembly both long and short reads together. A savvy workshop participant requested this upgrade for the PATRIC assembly pipeline.
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### Description of feature
A major problem we currently have during development is our CI tests are nowhere near comprehensive enough due to the pipeline utilising extremely large database files th…
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HI Arang,
One question I have is that I used hifi data on well assembled T2T genomes to predict QV and found in QV between 53-56(Completeness:93). And I found other genomes that are not T2T, some p…
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Hi,
I am trying to use this tool merge a hifiasm and a canu assembly, but I am running into some issues. The jobs seem to complete, but they are really short and I only end up with the delta files …
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Hi Ryan,
Things continue to work exceptionally well with Unicycler - thank you for such an easy yet powerful program. I'm getting hung up trying to complete one last sample (which is both pretty good…
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### Is there an existing issue for this?
- [X] I have searched the existing issues
### Describe the bug
Hello,
following this example:
https://learn.microsoft.com/en-us/aspnet/core/blazor/webas…
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### Description
Need the option to disable XAML source gen, this is necessary for native embedding of .NET MAUI on WinUI 3.
Have attempted to do native embedding of .NET MAUI on WinUI 3. Since bot…
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HI,
If I would create an Illumina assembly then could I combine the Illumina assembly contigs together with pacbio reads and run Racon, miniasm, and minimap as a hybrid assembly?
Thank you in adv…
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I am working with on both Illumina-only and hybrid assemblies and plan to use Unicycler to perform the de novo assemblies. Do you recommend using a read correction program such as Trimmomatic to do qu…
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Hi,
The final assembly length (contig and scaffold) is about 25% shorter than estimated (151Mb vs 199Mb). Could this be due to more than repetitive regions - i.e. coverage below some threshold? This…