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Building a SMALL index
readline() on closed filehandle __IN at METABOLIC-C.pl line 1965.
rm: cannot remove '/mnt/f/METABOLIC/METABOLIC_test_files/METABOLIC_out/*.bam': No such file or directory
rm:…
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Hi everyone,
I ran dbcan3 on my genomes, but the overview.txt output does not include signal peptide predictions (showed "N" for all CAZymes). I would be glad if anyone of you could help me to solve …
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Hello,
I've had a problem with the program. I'm trying to use it with 4 diferent genomes, but at certain point, there were the next errors:
[2021-02-15 11:12:17] Searching CAZymes by dbCAN2...
…
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Hi,
I got this issue and I wonder if you know what it might be the problem. I think it is something to do with headers because they might be longer than 16. Is there anyway to solve this without h…
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**Are you using the latest release?**
Yes, 1.8.10 installed from master
**Describe the bug**
Apparent conflict between SignalP 6.0g and Phobius during parsing. Possibly related to @Dikaryotic [co…
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Hi, I have freshly installed funannotate through conda, then removed augustus by using "conda remove --force-remove augustus". After that I locally installed augustus 3.3 through apt-get and redirecte…
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Dear all
I have just recently installed METABOLIC and wanted to run the METABOLIC-C.pl test run with the recommended command
```
perl ./METABOLIC-C.pl -test true
```
Everything seemed alright…
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How would you go about calculating diversity and assessing differences using DivNet for a subset of the members? For example, if you want to know the diversity of species in a specific genus or in my …
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Hi,
I have run of ideas on how to solve this.
Problem: funannotate annotate breaks in the dbCAN stage.
```
ValueError: The ID or alternative IDs of Hit 'CE10' exists in this QueryResult.
```
…
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Hi,
I try to run funannotate on a large number of fungal genomes (total > 70). Annotation of the individual genomes is very standardized and the same of all genomes. When I try to run funannotate c…
reslp updated
3 years ago