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On the CPU cluster the core usage drops to 5-10% when doing proteome-wide peptidoform search with 29 000 000 canidates. No clue why this happens.
Should test the C++ native implementation for matri…
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Cluster of RAB40B and XLOC_I2_008134 have the opposite phenotypes of a cluster of PIK3R3 and INSYN1 - googled most connections and got nothing so it may be novel.
Emailed Scott Soderling Duke Dec 1 h…
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Hi
I think that this protein is causing problems with the annotations. The transcript appears to encode for 2 proteins, one is a dbTF the other is described in UniProt as: Product of the upstream o…
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Hello interested contributors! Welcome to the `covid19-review` project. Our goal here is to provide an up-to-date perspective on the current peer reviewed and preprinted literature around diagnostics …
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Hi George,
I am Xiwei. Thank you for your help I have successfully run the program using one of my samples. However, it seems unfriendly to another sample since it is a bit large (The ibd file is …
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According to @irisdianauy report.
Many E-PROT experiments have nothing under the Supplementary Information tab. Doesn’t seem like by design, because when you do click on the Supplementary Information…
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### Description of the bug
Hi, thanks for the all useful docs and work so far!
I am currently trying to run DIA data through quantms. We are primarily interested in Phosphoproteomics but I would …
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Beginning with sequence-based searches of the literature via PaperBLAST and using the sequences acquired from PomBase, UniProtKB
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### Checks
- [X] I have searched **[the docs](https://greene-lab.gitbook.io/lab-website-template-docs)**, [existing issues](https://github.com/greenelab/lab-website-template/issues), and [existing di…
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e.g. the query
```SPARQL
SELECT DISTINCT ?item ?itemLabel ?_PubMed_ID
WHERE
{
?item wdt:P31 wd:Q13442814 ;
rdfs:label ?itemLabel .
OPTIONAL { ?item wdt:P698 ?_PubMed_ID. }
FIL…