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Populate with workflows :
https://docs.google.com/spreadsheets/d/1M-e0tpis_YiZ5avCtppifIr1_pvXb7dhDJJoHs7L120/edit?gid=2122588514#gid=2122588514
following completion of DNA-Seq alignments
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Current spreadsheet to track workflows:
https://docs.google.com/spreadsheets/d/1M-e0tpis_YiZ5avCtppifIr1_pvXb7dhDJJoHs7L120/edit?gid=2122588514#gid=2122588514
edsu7 updated
3 weeks ago
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- [ ] Any “throw new exception” (ex: line 95 in wes) should have an "error" log that prints the exception stack trace/ message before throwing the generic exception (like “Could not load WES run log”)…
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To provide backward compatibility support WES servers/clients, we need to provide a frozen-in-time version of the spec. Suggest we keep a major-minor-version in the `/openapi` folder for the repo lock…
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## Bug Report
### FilterIntervals
gatk FilterIntervals \
-L ${OUTPUT}/bins.interval_list \
--annotated-intervals ${OUTPUT}/bins_annotated.interval_list \
-imr OVERLAPPING_ONLY \
$INPUT…
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Hi,
Could you please point me to where I can find the BED files for whole exome data for AshkenazimTrio? `[HG002,HG003,HG004]` I would like to run some tests. Thank you so much for your assistance.
…
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### Proposal
**Topic of the session**
Node.js Tooling Group Collaboration Session
**Type of the session**
- [x] Collaborate
- [ ] Workshop
- [ ] Talk
**Estimated duration of the session**
1 hour…
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Spread sheets to track RNA seq alignment processing:
https://docs.google.com/spreadsheets/d/1M-e0tpis_YiZ5avCtppifIr1_pvXb7dhDJJoHs7L120/edit?gid=2122588514#gid=2122588514
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# Request a New Dataset
## What this form is for
To streamline the communication between team members about the fields, scope of data, and level of detail needed for new datasets in BigQuery and/or …
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## Detailed Description
Both sanger jobs
- run_id: wes-1469f0ee10cb4614bb318831c7694644, session_id: 1bf3424d-cd9c-4242-8667-26f114324925
- run_id: wes-fb4ba3a25cfb4278a93ffc024e90ae33, session_id:…