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Hello, I've installed topcons2 locally with all dependencies and executed the test command as described by the README in this git. The test command I'm referring to is
`../run_topcons2.sh one_seq.fa…
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Hi,
It's my first time using a NN framework, I've got the following information when trying to get it run.
Thanks a lot in advance for your help.
`2021-11-12 17:33:49.258190: I tensorflow/stream_ex…
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Hi there,
My python verion is 2.7.11. I installed pysamstats from github master directly after installing pysam-0.15.1.
I got the following error. What do you think might be the problem and how…
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Hi,
In MaSuRCA-3.2.7 the "Gap consensus" stage fails with the below error.
Not sure exactly how to fix this problem.
Thanks.
[Fri Aug 10 10:38:00 AEST 2018] Using linking mates
Using CABO…
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Hello, I have been trying to use chewBBACA with Salmonella enterica scheme from chewie-NS.
I started with a small dataset of 10 sequences, have been running into the Key error when trying to use All…
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last few lines:
make[2]: Entering directory `/home/ZXQ/soft/TRINITYNASEQ/trinityrnaseq-v2.10.0/trinity-plugins/bamsifter'
g++ sift_bam_max_cov.cpp -Wall -lhts -O2 -I../htslib -L../htslib -o bamsifte…
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# Description
For the project outlined in: https://github.com/Clinical-Genomics/project-planning/issues/453 we likely need to refine the trailblazer status updates for cases.
- Identify the cur…
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context: we are currently testing//POCing easybuild as our install framework in order to provide scientific softwares to our user.
installing BLAST+ and ABYSS using the same toolchain: goolf-1.4.1…
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Hi,
I'm trying to replicate your results in order to understand the analysis so I can use it later for my research question. Can you please share the miRNA and mRNA expression files to be used as i…
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Hi!! :)
I'm trying to run merqury but I can't obtain all the results. Could you help me please?
I'm following the steps:
# Step 1. Create meryl db:
`/opt/merqury-1.3/meryl count k=21 output /path…