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### Context
See [**single-cell-four**](https://czi-sci.slack.com/archives/C03PXFMM7ST/p1669834246736869?thread_ts=1668796762.169339&cid=C03PXFMM7ST).
@jahilton has noted that the [Seurat encoding](…
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**Primary Wrangler:**
Wei Kheng Teh
**Secondary Wrangler:**
**Associated files:**
Paper: https://www.biorxiv.org/content/10.1101/2021.11.26.470108v1
Ingest: https://contribute.data.humancellatl…
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### Project short name:
~~HumanmyocardialInfractionSpatialMap~~ myocardialInfarction
### Primary Wrangler:
@ESapenaVentura
### Secondary Wrangler:
Ida
### Associated files:
* Google Drive: https…
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## Describe the bug
Data type of some columns in "obs" used to be "large-string" but now are "dictionary".
## To Reproduce
```
import cellxgene_census
CENSUS_VERSION = "latest"
VALUE_FILTER…
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# Spreadsheet to Cell Annotation JSON Converter
## Introduction
This tool is designed to convert spreadsheet/CSV files into a Cell Annotation JSON schema. The conversion process includes parsing m…
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## Definition
Census enables users to perform _in silico_ experimentation to interrogate genes responsible for cell states recorded in the CELLxGENE metadata (e.g. cell type, disease, development sta…
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If parent and the child has the same set of cell ids, system cannot associate parent and child:
Reproduce steps:
1. Dataset: CellXGene_dataset:e4ddac12-f48f-4455-8e8d-c2a48a683437
2. labelsets:
…
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Hello, I am having a very similar issue to this one here, which seems to still be generally unresolved.
https://github.com/satijalab/seurat/issues/6870
Basically, I have a very large h5ad file, co…
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I defer changing this issue to an epic and adding child issues to the Dev lead for schema 5.1.0. Generally, I prefer to track individual additions and updates, but Visium Spatial Gene Expression creat…
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