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> for bug reports and errors please report the output of: ./gapseq test
Hi
I am now test-running a gapseq with the following command
conda activate Gapseq ;
Tool="/home/sandia/softwares/…
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I would like to update the default emu database (NCBI + rrnDB); in your paper you explain to use the build custom db on both separately and then concatenate, but am not sure how to concatenate both fi…
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```R
cc_cen %
cc_cen(
lon = "decimallongitude",
lat = "decimallatitude",
buffer = 2000,
value = "clean")
```
> error in evaluating the argument 'obj' in selecting a method for functi…
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Session Info
```r
Session info ------------------------------------------------------------------
setting value
version R version 3.4.3 (2017-11-30)
system x86_64, linux-gnu
ui …
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Hi there,
I'm continuing to troubleshoot the db-update process for a kraken2 database, and I've hit a wall at the kraken2_build step. The pipeline doesn't throw any errors; it just continues to run…
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Taxon assignment is currently performed by running DIAMOND blastp on contig proteins, finding the LCA and majority vote.
Currently, the blast result simply returns the top 200 database hits which …
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I attempted to create an alignment from a seed of six sequences from four species (this is my input csv file):
===========================
species,name,aliases,sequence,accession
Homo sapiens,TTHY_…
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Currently,
```makefile
soil-vs-water-slot-usage.yaml: src/mixs/schema/mixs.yaml
$(RUN) extension-differences \
--schema $< \
--ext1 Soil \
--ext2 Water > $@ only reutnrs
```
only r…
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Linking this over here so we don't forget about it:
https://github.com/galaxyproject/tools-iuc/issues/2435
Came up a Gitter today, too. Let's try to make it less confusing going forward. I'm not…
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## Affected Version
SilverStripe 4.3+
## Description
If I create a `DataObject` and give it different `summary_fields` and `export_fields`, but use a simple sequential array for `export_field…