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10x Barcodes with v2 chemistry work like this:
examples from `merge_barcodefiles_10x()`
looks like there [may be some confusion](https://github.com/pachterlab/sircel/blob/master/sircel/IO_utils.py#L…
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Hi there, I was wondering what the difference between RTP/ VN and a forward primer is based on the 10x - 3' protocol doc.
The TSO in my protocol seems to match the one in the restrander config file.…
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Hi!
Would i be possible for a user to somehow change some parameters/settings so other dataset types could be used instead of 10X?
In 10X the barcodes and UMI's are positioned and located as such: '…
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Hi,
I tried integrating three PBMC snRNAseq data from 10X Genomics multiome datasets with two scRNA seq data from a 10X Genomics Public dataset. However, all the data from the multiome clusters sep…
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This is about **Bulma**.
### Overview of the problem
This is about the Bulma **CSS framework**
I'm using Bulma **version** [1.0.2]
This is a **Sass** issue: latest dart-…
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Hi, congratulations for the project, great job.
I have some questions regarding the analysis of Chromium 10X format data.
From the documentations:
catt --tenX --f1 R1 --f2 R2 -o outputName
Chr…
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When processing 20GB+ of logs, several of these scripts can take some time: between 4-8 hours on a modern Macbook Pro.
It's been suggested that the Aho-Corasick automaton algorithm (pyahocorasick) …
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`Guid.NewGuid()` is 10 times slower on Linux compared to Windows.
| Slower | diff/base | Windows Median (ns) | Linux Median (ns) | Modality|
| -----------------------------…
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How to fix orbit lines? JNSQ 10x Rescale
![20241020163836_1](https://github.com/user-attachments/…
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Once the BE endpoints are created, we should do some performance testing to make sure that returning all the listings on the homepage via the new listing endpoint won't cause problems if we have 10x t…