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- [x] [Cooper GF. A simple algorithm for efficiently mining observational databases for causal relationships](https://www.dbmi.pitt.edu/sites/default/files/Cooper_9.pdf)
- [x] [Detection of pharmacov…
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Hey @tillea @mr-c
pinging you since I'm about to release a new feature for Diamond to directly read BLAST databases. I'm doing this by linking against the shared libraries from NCBI, all of which ar…
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We need from each sub-group is a contribution of 2-3 paragraphs describing your group's hackathon successes and ongoing activities. Also (to save Mark look-up time) please list all authors from your …
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Hello everyone,
I building GTDB databases to be used along with Kraken2. I was wondering if it was possible to add viral refseq sequences while building kraken2 databases? GTDB consists of archaeal a…
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I've been doing a lot of prefix mapping across various registries and been pleasently surprised to find few conflicts. Unfortunately, both the Geographical Entity Ontology and the Gene Expression Omni…
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What did you add to the Day 2 Notes page.
if you are having trouble finding it...
https://github.com/sr320/austral/wiki/Day-02-Notes
sr320 updated
9 years ago
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When running the "annotate" step in enrichm of the latest version (installed via conda), ERROR happened as below.
[2019-08-17 15:04:12 PM] INFO: Running command: /data/software/miniconda3/envs/enr…
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consider this: https://github.com/maxogden/dat-oakland-land-use
look at the package.json `import` script. it essentially does these commands
```
wget -N http://data.openoakland.org/sites/default/fil…
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Thank you for making this amazing set of resources available. It is not really an issue but a question about a strategic decision.
If one was to start a project in cancer research using short-read d…
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_From @olgabot on June 18, 2014 5:58_
Hello there,
This is Olga Botvinnik and Mike Lovci (@mlovci), PhD students in Bioinformatics-type fields at UC-San Diego working on a biological data analysis pa…