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Asking for ability to plot numerical data from an arbitrary column of coordinate sorted, bgzip compressed and tabix indexed data file.
This kind of data is quite common output from various genome…
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Human - [1000 genomes data](https://www.internationalgenome.org/) might not be the best currently available. Or [gnomAD](https://gnomad.broadinstitute.org/downloads), which has hella more genomes. It'…
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### Source Name
Database of Genotypes and Phenotypes (dbGaP)
### Source URL
https://www.ncbi.nlm.nih.gov/gap/
### Source Description
The database of Genotypes and Phenotypes (dbGaP) was developed…
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Previous submissions of the fission yeast genome have used "locus_tag" for the systematic identifier (since before 2002).
We are now being asked to use "old_locus_tag" because the PomBase locus_tag…
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Is there a way to increase the visibility of SNPs at wider views? In the example below, I can see SNP differences between alignments in a 56 kb window, but not in a 140 kb window, which encompasses th…
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Hi,
When running the example you provided:
`python READ2.py -i Srubnaya.subset_bed`
I get an error:
```
===Thank you for using Relationship Estimation from Ancient DNA version 2 (R …
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>The rapid progress of gene expression profiling has facilitated the prosperity of recent biological studies in various fields, where gene expression data characterizes various cell conditions and reg…
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http://doi.org/10.1101/069096 (also http://biorxiv.org/content/early/2016/08/11/069096 because the DOI isn't working for me)
**At a glance:** Uses a pretrained DeepSEA model (#13) to filter and group…
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I've been asked to permute sample identities to test how many DMRs emerge from our data randomly as it from a low CpG methylation genome (~0.7% genome wide). The design is paired and I have used a pai…
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This issue contains monthly updates to the ranked list of PubMed papers for curation. The full list can be found [here](https://github.com/tanayshah2/bioregistry/blob/5560dcf284f2c0309287e0a5a551e435e…