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In the graphical display and the tabular display, it would be good to have a "Loading" message while the data is being loaded so the user knows that something is happening.
When the loading is fini…
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It would be helpful to add a sample directory for easier testing of app functionality
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Hi @cmdcolin and @nathandunn,
I followed this [topic](http://gmod.827538.n3.nabble.com/elastic-search-in-genome-apollo-td4059909.html) and did change a little of its `docker-compose.yml` file. Please…
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Hi Travis,
I continue to love this plugin. While it works great for C. elegans at WormBase, where genes are relatively short, do you have any suggestions for working with mammals, where genes are …
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Hello @yeban and @yannickwurm
I would like to bring back to your attention an issue I have mentioned to both of you a few times: Afra should display the Apollo logo. Afra is written as a modificatio…
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Given that BED files are very common, we need to support Tabixed BED as well.
Reference
- https://github.com/GMOD/jbrowse-components/tree/4a35910bd2759ae5aa6174a15498953ff3e17f16/plugins/bed/src/B…
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The GDC has both open and controlled MAF files. See below for more information
* https://docs.gdc.cancer.gov/Encyclopedia/pages/Mutation_Annotation_Format/ (see references for some useful information…
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Hello @cmdcolin,
We are deploying JBrowse2 @UMCCR, [primarily for the htsget support](https://github.com/umccr/data-portal-client/pull/88), so that different web-based clients work fine using one d…
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Hello,
We have a complex project that depends on jbrowse as an npm dependency. JBrowse is a rapidly evolving project, and I'm trying to work through how to better manage jbrowse version changes. Be…
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The linear synteny view with all the polygons uses a render optimization where multiple drawing operations are batched into a single operation (multiple line drawing operations get a single canvas.str…