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Hi,
I noted that you write I can use multiple Raw files, but not multiple tsv files? is there an ability to run LFQ for multiple files? if yes, does the program does normalization between files?
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I use the `dep_results` dataset for testing the GO functions. It is based on the `DEP::UbiLength` dataset, which is a MaxQuant proteingroups.txt output.
I find `UbiLength` to not be well documented…
csdaw updated
2 years ago
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@jgockley62 identified inconsistencies in CERAD scores for individuals from the Banner cohort in the original [Banner LFQ proteomics traits file](https://www.synapse.org/#!Synapse:syn9740295) and the …
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### Description of feature
Would be good to test for multiple datasets the impact of the parameter `num_hits`. The idea would be seen how this parameter will affect the identification step and the qu…
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Using PaRSEC commit `7f81a1b` (2023-01-19) and DPLASMA commit `75012ef3f` (2023-01-23), the m, n, and k data in the trace of a GEMM is not present when using the dtd interface.
### To Reproduce
1.…
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- [ ] [Correlated gene modules uncovered by high-precision single-cell transcriptomics](https://www.pnas.org/doi/abs/10.1073/pnas.2206938119)
- [x] [Dynamics of single-cell protein covariation during…
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Hello!
I have been exploring the package and had a question on how the 'precursor_indices' is defined.
When I filter based on the precursor index (1 in this case), get two distinct quad isolation.…
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Thanks for the excellent collection and implementation of vector quantization techniques! It is very helpful for me to get to know about this technique and study the details.
I've integrated these …
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I use test_diff to conduct Differential enrichment analysis, I had impute my data using MLE methods in advance. I found for the same protein, the p-values derived from different runs were divergent fr…
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Hi @lucidrains , thanks for your awesome work! I used your causal conv implementation and trained on a video vqgan network. The results are as follows:
Original clip sequence:
![36500_image](https:…