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There will be format changes in the fall. There is now a dedicated repo for support on GitHub: https://github.com/ncbi/clinvar
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My understanding is this tool is run on an uploaded fastq if requested by the submitter? If so, is there any metadata for a run that tells one of the tool has been run on the fastq? For example, I wo…
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Using free-text entry for the Sequencing Platform field (instrument_model in the submission.xml file) has generated NCBI processing issues in previous submissions. For example, entering "Illumina HiSe…
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Our current AIRR submission dialog uploads all data files, together with the corresponding MiAIRR instance, to CEDAR's submission server. When the upload is complete, the submission server generates t…
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Hi,
Referring to the dataset and records below
GBIF dataset: [INSDC Sequences ](https://www.gbif.org/dataset/d8cd16ba-bb74-4420-821e-083f2bac17c2)
GenBank record: https://www.ncbi.nlm.nih.gov/n…
ymgan updated
9 months ago
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**Overview of the Feature Request**
Possibility of exporting a dataset metadata in a format for NCBI's Genbank/SRA
**What kind of user is the feature intended for?**
(Example users roles: API U…
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### Description
As a developer, I want to have a list of essential and desirable attributes for the humanized models to start working on changes to the data model to support these models.
“Minim…
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Hello,
I am requesting two new terms for organic materials relating to fungi. These would be used for "env_medium" annotations of DNA sequence data submitted to NCBI. This is my first new term req…
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Investigate how GenBank submission can be made from AIRR template (in addition to current BioProject/BioSample/SRA submission).
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https://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/asnval_8cpp_source.html
The problem is that this is C++ and we have to convert these to ASN. Distributing the C++ binaries prebuilt might …