-
From https://github.com/sars-cov-2-variants/lineage-proposals/issues/1856
In the new usher update it moves most of the previous KP.3.1.3 seqs to KP.3.1+G25644T+S:S31F branch. This shall be the cor…
-
From:
https://covid19.bioreproducibility.org/
Some key pieces would be:
- structure determination method (homology models would be from different source)
- species
- major ligand
- structural …
-
**Name of the dataset**
Reactome SARS-CoV-2
**Mapping or relevant fields**
Minimal: gene product to pathway
Future: GO-CAM granular representation
see also
https://github.com/geneontolog…
-
[SARS-CoV-2:COVID-19 Join Link](https://join.slack.com/t/sars-cov-2covid-19/shared_invite/zt-cr6ln0ph-6eDATfSUNDtFK3mlQxqYKw)
[Slack SARS-CoV-2:COVID-19 URL](https://sars-cov-2covid-19.slack.com)
…
-
Is the training source code available? We want to refer to your [article](https://doi.org/10.3390/ijms232314683) in our paper as a baseline for SARS-CoV-2, comparing our results (not out yet) with you…
-
We received the 8 purchased analogues of the original hit #2: [RA-0020083-01](https://github.com/StructuralGenomicsConsortium/CNP27-SARS-CoV-2-NSP14/assets/133207721/4df27ee7-dd09-4cfb-b4a6-b43c6f4651…
-
**Resources:**
- LOINC pre-released COVID-19 related terms:
https://loinc.org/sars-coronavirus-2/
- FDA EUA authorized IVD tests:
https://www.fda.gov/medical-devices/emergency-situations-medi…
-
We have examples where there is a choice of two primers for the end of a given amplicon. Only one primer of the two primers has support from the reads.
Observed behaviour: Both primers are kept, in…
-
Hi, our group is using iVar in our ARTIC SARS-CoV-2 workflow. When calling variants, it is listing the deletion at 28,254 with stats that don't match the frequency and POS as -1. See below. What co…
-
# Design
In 2025, the multiple species roadmap requires the following policy changes:
1. There MUST be one `obs['organism_ontology_term_id']` per dataset, previously requested in [Handling of mu…