-
The discussion doesn't really have any narrative flow at the moment, and is pretty obviously a collection of things that we didn't know where to put.
1. What do we do with the ana-fits paragraph? W…
-
I think this is a bug in the current stable version of *phangorn*, with R 3.4.1. Reproducible code below:
```
library(ape)
library(phangorn)
library(adegenet)
dna
-
The following links are broken.
----------
## [Publicly Accessible Galaxy Servers](https://galaxyproject.org/public-galaxy-servers/)
### [VirAmp](https://galaxyproject.org/public-galaxy-serve…
-
We're currently defining tree sequences as representing the genetic history of a sample of individuals subject to recombination. However, we (I think) can also use the basic ideas to efficiently repre…
-
Could you add these flags, found in the hmm export function, to export pc alignments as well?
```
--max-num-genes-missing-from-bin INTEGER
This filter removes bins (or g…
-
I have named regions in my database, and I think that might be a data type worth including in future CLDF releases. Macroareas (https://github.com/glottobank/cldf/blob/ff33e40dbccabaf1191f08eb8f486a13…
-
It would be nice to be able to subsample a dataset (after the results of all other language filtering features BEASTling provides, like by family, by macroarea, etc.) to a specified number of langs (e…
-
We need to revamp the phylogeny of the D-genome, minimally for ancestral state reconstructions. Introgression among members of the D-genome and with other cottons complicate this, mostly for G. gossy…
-
When trying to print, we get
```
julia> x = linspace(0,2*pi,1000); y = sin(3*x + 4*cos(2*x));
julia> plot(x, y, color="red", linewidth=2.0, linestyle="--")
Exception in Tkinter callback
Traceback (m…
-
Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/GuangchuangYu/tidytree
Confirm the following by e…