-
Here's the steps to reproduce errors in searching:
Home>Query Database>Search By Protein>
Type in 'calreticulin' in the search box and search.
Select the "Calreticulin OS=Mus musculus GN=Calr PE=1 S…
-
Hi @rmhubley and everyone,
I finished several rounds of RepeatModeler, but I have an error in the RepeatClassifier step. It seems I am missing several required files for RepeatClassifier: `RepeatP…
-
The subject of the task is to handle situations in which one data item has multiple:
- contract tags,
- input tags.
In this case, such a data item can be treated as multiple interactions.
Requ…
-
Hi all,
I have annotated the example E. coli K12 genome & my genome of interest using run_dbcan on a virtualbox linux system and I had no issues with errors in the code, and the output data files w…
-
Hello,
I have been trying to follow the steps to generate a kraken2 db of all bacteria. I've run the commands
`kraken2-build --threads 8 --download-taxonomy --db all_bac`
`kraken2-build --down…
-
Still needs work, esp around talking about what sourmash is actually doing. But first pass!
Charcoal identifies and removes contamination in metagenome-assembled genomes using k-mer based methods.
…
-
No issues, I just have a quick question:
Are there any circumstances where running clusterupdate would result in breaking a cluster into two or more clusters after the update? For example, if the …
rtn28 updated
2 years ago
-
```
- MS on real nucleotide molecules (not only MS on AA sequences that use
nucleotide sequence databases)
- MS experiments on glycans
=> extend schema with SmallMoleculeCollection, GlycanCollection,…
-
There needs to be a way to take the blast hit and be able to link out to the region in the genome in the browser where that blast hit occurs. Ideally, the blast hit region should be a track.
-
Currently, I am not able to combine mmseqs alignments with the most recent alphapulldown code base. I have a few questions to check if I understood correctly from [here](https://github.com/KosinskiL…