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Hi there, thanks for developing such an easy to use tool. We would like to run SvAnna with VCF outputs from PAV. It seems that SvAnna is truncating the vcfs in a way that is not obvious. We are runnin…
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gar2 is nucleolin, nucleolar histone chaperone required for rRNA metabolism
UniProtKB:P41891 | gar2 | enables | GO:0003730 mRNA 3'-UTR binding | ECO:0007826 IEA | GO_REF:0000118 | PANTHER…
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Many SCENIC jobs are very long running and a user can wonder if progress is being made. Having a mechanism to track progress would be very useful.
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The pattern `http://identifiers.org/hgnc/HGNC%253A29350` was found in a linkset but was not recognized by BridgeDB. However it does redirect to the correct place which suggests that identifiers.org do…
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The position converter for the version 2 of mutalyzer was great at distinguishing between transcripts, but now does not seem to provide that function easily. Is it possible to have the previous featur…
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RefSeq GRCh37/GRCh38 joint historical do not have any contigs of "NC_012920.1"
There are 37 entries for contig NC_012920.1 in the latest GFF file:
```
zgrep NC_012920.1 GCF_000001405.40_GRCh38.…
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I thought at first it was related to https://github.com/monarch-initiative/monarch-ui/pull/214, but it turns out this is because gene definitions are fetched on the client/browser by querying mygene, …
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Analyzing a case with a gene panel that contains the MAP3K20 gene and when I load the gene list I get the message that the gene isn't present in the database's genes collection. Trying to filter for t…
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Should have 2M variants /cc @iskandr
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## Basic information
```
❯ pip show cellphonedb
Name: cellphonedb
Version: 5.0.1
Summary: Inferring cell-cell communication.
Home-page: https://github.com/ventolab/cellphonedb
Author: The Cel…