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Hi Markus,
Thank you for your help with my previous issue! I am now interested calculating the cancer cell fraction of CNVs called by PureCN. I know this information is available for SNPs, and I fo…
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Hi，
First of all, thank you for developing this package! It has been incredibly helpful.
I am pretty new to analysis scTCR-seq data. I have been following your tutorial, which seems to focus on …
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# 时间表
# 演讲者
), a problem related to rbind…
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Data integration work from the ADC is being performed under the https://github.com/airr-knowledge/ak-schema/tree/airr-export branch.
Particular code for converting data from the ADC into the AKC is…
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Hi! Thanks for developing this amazing tool. I have a conceptual question regarding the filtering step.
In the paper, you mentioned:
> Here, by default, the 10x cellranger clonotype definitions…
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@nh13, @jacarey, @jmarshall, @yfarjoun : I'm looking for opinions here. With the popularity of the HiSeq X and HiSeq 4000 which produce a lot of duplication on the sequencer that is geographically co…
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We need examples of the types of experiments and queries which are going to be executed against `data-refinery` data.
These examples should include the perspectives from bioinformaticist, bench re…
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### Description of the bug
I encountered an error when running the command :
"Automatic clone_threshold is 'NA'. Consider setting --clonal_threshold manually."
After setting the --clonal_threshold …
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Hello
I am looking at adding GRIDSS to parliament, but it appears that survivor does not support GRIDSS output. AFAIK, GRIDSS is fully compliant with VCFv4.3 but there are a number of issues I've e…