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Issues and project management for the AKC
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VDJServer's IgBlast
#53
schristley
opened
1 week ago
0
AIRR-seq VDJ annotation workflows
#52
schristley
opened
1 month ago
0
AIRR-seq pre-processing workflows
#51
schristley
opened
1 month ago
1
AKC workflows for AIRR-seq from ADC
#50
schristley
opened
1 month ago
0
Create initial Makefile rule for ROBOT export to SQL table
#49
schristley
opened
2 months ago
0
Installation and configuration of staging server
#48
schristley
opened
2 months ago
3
Aim 3.2B: Interim enhanced GUIs implemented
#47
schristley
opened
2 months ago
0
move linkml enums into ak-ontology
#46
schristley
opened
2 months ago
0
initial ak-tools with a suite of custom tools and tools pulled from repositories
#45
schristley
opened
2 months ago
0
Aim 2.6B: Interim data propagation and provenance processes implemented
#44
schristley
opened
3 months ago
0
Aim 2.6A: Assessment of data propagation and provenance
#43
schristley
opened
3 months ago
1
Aim 2.5B: Interim query API specified and implemented
#42
schristley
opened
3 months ago
0
Aim 2.4B: Interim validation processes implemented
#41
schristley
opened
3 months ago
0
Aim 2.4A: Assessment of validation needs
#40
schristley
opened
3 months ago
1
Aim 2.3B: Interim new knowledge algorithms implemented
#39
schristley
opened
3 months ago
0
Aim 2.3A: Assessment of new knowledge algorithms
#38
schristley
opened
3 months ago
2
Aim 2.2B: Interim integration algorithms implemented
#37
schristley
opened
3 months ago
0
Formalize OGRDB API with OpenAPI V3 spec
#36
schristley
opened
3 months ago
2
Aim 1.4B: Interim validation processes implemented
#35
schristley
opened
3 months ago
0
Aim 1.3B: Interim data harmonization incorporated and automation complete
#34
schristley
opened
3 months ago
0
Use cases collected (3.1B)
#33
schristley
closed
3 months ago
1
CURIE conundrum
#32
schristley
opened
3 months ago
20
Checklist for LifeEvent Class
#31
schristley
opened
4 months ago
1
Consider patterns to be used to restrict sequence data in the AIRR (and other) objects
#30
schristley
opened
4 months ago
0
Checklist for Rearrangement Class
#29
schristley
opened
4 months ago
2
import AIRR Data Model into AKC LinkML
#28
schristley
opened
4 months ago
20
Checklist for Simulation Class
#27
schristley
opened
4 months ago
6
Checklist for Adaptive Immune Receptor Class
#26
KevinABurns137
opened
4 months ago
1
Checklist for Investigation Class
#25
schristley
closed
1 month ago
6
Checklist for Participant Class
#24
bcorrie
closed
2 months ago
39
Update readme, fix mkdocs error, project team link in code of conduct
#23
schristley
closed
2 months ago
2
create SOT/ontology repo for AK
#22
schristley
opened
6 months ago
9
Promote AKC awareness (3.3A/B)
#21
schristley
opened
6 months ago
0
Query API architecture finalized (2.5A)
#20
schristley
closed
2 months ago
2
Data elements for integration identified (2.1A)
#19
schristley
opened
6 months ago
0
Knowledge architecture finalized (2.2A)
#18
schristley
closed
2 months ago
5
Generate/document list of relations being used by each repository
#17
bcorrie
closed
6 months ago
8
Generate/document list of data standards (and related technologies) being used by each repository
#16
bcorrie
closed
5 months ago
13
metrics and compliance dashboard
#15
schristley
opened
7 months ago
2
Generate/document list of automation needs for each repository
#14
schristley
closed
2 months ago
4
Generate/document list of current curation/extraction/annotation processes for each repository
#13
schristley
closed
2 months ago
4
Generate/document list of object/concepts being used by each repository
#12
bcorrie
closed
6 months ago
3
Generate/document list of gaps and anticipated new fields, objects, ontologies, ontology terms, relations
#11
schristley
opened
8 months ago
0
Interim standards released (1.1B)
#10
schristley
opened
8 months ago
0
Interim data model and harmonization (1.2A)
#9
schristley
opened
8 months ago
1
Assessment of validation processes and needs (1.4A)
#8
schristley
closed
2 months ago
4
Assessment of curation/extraction/annotation processes from public archives (1.3A)
#7
schristley
closed
2 months ago
3
Generate/document list of ontologies being used by each repository
#6
bcorrie
closed
7 months ago
9
Overlap/alignment of fields between repositories
#5
bcorrie
opened
8 months ago
1
Generate/document list of 'fields' for IEDB
#4
bpeters42
closed
4 months ago
11
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