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Hello!
Bonne année
## 🚀 Feature
lt could be very useful for us to have rudimentary support to render multiple channels volume images in Napari.
Specifically the rendering depends on the valu…
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Is it possible to have an option where I can turn off the detrending, for example if I have known period of 'baseline' vs 'task epochs' and so that I am able to do custom baseline subtraction downstre…
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Short Java error:
```
java.lang.OutOfMemoryError: GC overhead limit exceeded
```
Short Python error track:
```
Cell In[8], line 1
----> 1 voluseg.step3_mask_volumes(parameters)
File /m…
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Probably good to change how/where we are putting the raw data. I guess I have started doing this with the `assaytools/data` folder, where the data is separated out by data type (singlet, spectra, etc.…
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"B.G.-M. and M.d.J.S.M. are inventors on a patent application that describes QRBF."
- 2014 [Direct Imaging of Phase Objects Enables Conventional Deconvolution in Bright Field Light Microscopy](http…
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Hi there! I tried fluorescence deconvolution with the example notebook and encountered a few issues:
1) In file `waveorder_reconstructor.py`, `Hz_det_setup` calls `gen_Pupil` function which is miss…
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Query
```param_paths = ["FA/FERRYBOX/C3/CDOM_FLUORESCENCE/RAW"]
start_time = "2023-02-01T11:00:00"
end_time = "2023-03-26T16:00:59"
t = pyniva.get_ship_data(
vessel_name="FA",
param_pat…
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Let's discuss evaluation metrics for `spikefinder`!
The data for doing evaluation will be, for each neuron, a fluorescence trace and an estimated spike rate. Presumably the rate will be either binar…
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Opening a discussion for how to format both the input data and the results / submissions.
According to @philippberens the raw data will be both calcium fluorescence and spike rates both sampled to 10…