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Hi Quentin
I haven't managed to find any information about how IGoR handles allelic variants presented in models. In default models some IGHV, TRAV and TRBV genes have several alleles (up to 7) and…
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Hello,
First of all, thanks for providing such a fantastic tool!
I wasn't quite sure where to write this because it's not strictly a bug, but I thought it worth highlighting the fact that dupl…
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_POU5F1_ has two copies in the primary (paternal) haplotype but only one in the maternal. It looks like the segment containing the second paternal copy is a spurious duplication, as it has near-zero c…
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![image](https://user-images.githubusercontent.com/77486663/201339273-4e011f74-7904-4498-8b1b-3135b760ad54.png)
I get the result, but the file Tree2GD.result.pdf opens like this, which is different f…
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Dear David,
What determines which species tree root is kept for analysis when the following warning shows: " Multiple potential species tree roots were identified, only one will be analyzed"? (I ha…
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For a codiv analysis, add a term for every node that is part of a simplex of all sister nodes. This forces the model to 'expect' that the abundance of a parent node will be divided among it children.…
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### Submitter Name
Arpad Danos
### Submitter Affiliation
Washington University
### Submitter Github Handle
arpaddanos
### Additional Submitter Details
_No response_
### Project Details
…
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I wonder what an `as.tibble()` method would look and feel like, with columns corresponding to gene, barcode, and data.
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It would also be nice to have a column which indicates whether the sgSTOP recapitulates a frequent mutation in cancer or a place to search for cancer genes only.
ghost updated
6 years ago