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This helpful information provided by Jeff Henrikson (Unsecret Agent):
Apparently the [SRI Node Normalizer code](https://github.com/TranslatorSRI/Babel) produces a JSON-lines file,
https://stars.re…
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ROBOKOP needs to store properties alongside identifiers; this might be something that is useful for other users to have as well. Since Babel needs to read through the input files anyway, it might make…
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KGX needs to be updated to align with the latest Biolink Model standards?
See https://github.com/biolink/biolink-model/issues/922
Do we need to keep legacy support of older Biolink Model slots, …
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### Describe the bug
The `agro` transform appears to go as expected, until it hits post-processing:
```
Transforming agro to tsv...
[KGX][cli_utils.py][ transform_source] INFO: Processing sou…
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### Summary
The syntax highlighting is wrong with multiple default function implementations for a type-class in Haskell (like rust traits).
![image](https://github.com/user-attachments/assets/bba7a9…
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Sometimes there is more than one station that a traveller could start from or go to to complete their journey. e.g. in Cambridge both CMB and CBG are valid starting points and LST/KGX/STP might be val…
drt24 updated
6 years ago
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We're trying to update package dependencies from v 0.5.0 to v 1.1.0 (kg-covid-19; kg-microbe). For a knowledge graph generation from JSON as shown in the title, the old version used `PandasTranformer`…
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Generating mappings between BioPortal ontologies and OBO ontologies will provide additional strategies for integration. LOOM mappings capture some of this space, but require lexical similarity between…
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How does Upheno relate to our target MP and HP phenotypes? How may it help to connect them (and hence give our models a way to learn connections between them)?
We currently have a set of Upheno gol…