-
Example: https://mila.quebec/en/publications/
It would be nice to reuse the same code as in the Mila website. Not sure if that's 'easily' possible via RTD
-
## Data updates
- [x] Export annotated CM and SEED files
- [x] Update PDB mapping
- [x] Run view processes
- [x] Run clan competition
- [x] Run make_rfam_keywords_table.pl
- [x] Update family_…
-
Hello
I installed the latest version of miRge3.0
```
miRge3.0 --version
3.0
```
into a conda environment. However, when I look at the help/documentation I see different output than on the docu…
-
Dear Barton lab,
We are trying to make works yanocomp with Arabidobsis DRS data you published Col-0 and vir-1.
However, we got these two errors during the prep step for the dataset:
**Firs…
-
Hello,
I was curious to know how you (the authors) settled on a value of 0.1 as a default for crThreshold. Is this based on previous literature or was it based on simulations you performed?
Just t…
-
Dear all,
I suppose that all packages depending on `cgdsr` will use `cBioPortalData`.
Concretely,
1- Is there an equivalent to theses 6 commands?
2- The structure of data in `cgdsr` remain the sa…
-
https://mp.weixin.qq.com/s/jrQRdx8RKwtmgk0IGbuAWA
-
Hello,
I'm trying to run multiple microRNA samples and the pipeline start to die at the trimming step : Any suggestions
nextflow run nf-core/smrnaseq -r 1.1.0 --input sample.sheet.csv -profile …
-
There is probably a simple explanation for this. Mostly likely I've just forgotten, in my old age. But I could use a refresher. So in `/home/ubuntu/kg2-build/kg2-ncbigene.json` on `kg2lindsey.rtx.ai` …
-
Hi
I got a question which I was not able to solve yet
If I am only interested in lncRNAs related to `Angiogenesis GO term` how to download such a list please?
I searched for `Angiogenesis` in…